ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5y6qB3 - ECOD Domain | ECOD

ECOD/Domains/e5y6qB3

e5y6qB3

UID: 002142388

PDB

Range: B:227-330
PDB: 5Y6Q chain B(all domains)
UniProt: Q84IX9 (all domains)
Gene: aomm

Molecule: Aldehyde oxidase medium subunit

3D Structure

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Related Domains

Browse other domains in CO_deh_flav_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupSufE/NifU(244.3)

TT-groupSufE/NifU(244.3.1)

FFamilyCO_deh_flav_C(244.3.1.3)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF03450CO_deh_flav_C

CO dehydrogenase flavoprotein C-terminal domain

ClanCL0233SufE_NifU

External Links

ECOD PDB View: 5Y6Q RCSB PDB: 5Y6Q PDBe: 5Y6Q UniProt: Q84IX9

Downloads

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Drug annotations from DrugDomain.