ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5oobJ1 - ECOD Domain | ECOD

ECOD/Domains/e5oobJ1

e5oobJ1

UID: 002146290

PDB

Range: J:4-151
PDB: 5OOB chain J(all domains)
UniProt: P52298 (all domains)
Gene: NCBP2

Molecule: Nuclear cap-binding protein subunit 2 (20 kDa nuclear cap-binding protein) (Cell proliferation-inducing gene 55 protein) (NCBP 20 kDa subunit) (CBP20) (NCBP-interacting protein 1) (NIP1)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRRM_1(304.9.1.1)

Pfam Families

RNA recognition motif

ClanCL0221RRM

External Links

ECOD PDB View: 5OOB RCSB PDB: 5OOB PDBe: 5OOB UniProt: P52298

Downloads

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