ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5wipB1 - ECOD Domain | ECOD

ECOD/Domains/e5wipB1

e5wipB1

UID: 002146432

PDB

Range: B:88-230
PDB: 5WIP chain B(all domains)
UniProt: Q17U16 (all domains)
Gene: traE

Molecule: Conjugal transfer protein (TraE) (TraE, Inner membrane protein forms channel for type IV secretion of T-DNA complex, VirB8) (Type IV secretion system protein)

3D Structure

Loading viewer...

Related Domains

Browse other domains in VirB8 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupCystatin-like(243)

HH-groupNTF2-like(243.1)

TT-groupNTF2-like(243.1.1)

FFamilyVirB8(243.1.1.6)

Pfam Families

VirB8 protein

ClanCL0051NTF2

External Links

ECOD PDB View: 5WIP RCSB PDB: 5WIP PDBe: 5WIP UniProt: Q17U16

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure