ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ws9A1 - ECOD Domain | ECOD

ECOD/Domains/e5ws9A1

e5ws9A1

UID: 002146490

PDB

Range: A:2-70,A:167-344
PDB: 5WS9 chain A(all domains)
UniProt: P9WKE5 (all domains)
Gene: pyk

Molecule: Pyruvate kinase

3D Structure

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Related Domains

Browse other domains in PK →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPK(2002.1.1.11)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Potassium ionK
metal
Magnesium ionMG

Pfam Families

Pyruvate kinase, barrel domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5WS9 RCSB PDB: 5WS9 PDBe: 5WS9 UniProt: P9WKE5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (Oxalate ion)

Oxalate ionOXL

Shown in the structure viewer. Drug annotations from DrugDomain.