ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5up4S1 - ECOD Domain | ECOD

ECOD/Domains/e5up4S1

e5up4S1

UID: 002148281

PDB

Range: S:1-146
PDB: 5UP4 chain S(all domains)
UniProt: B6DRA0 (all domains)
Gene: gag

Molecule: Gag polyprotein [Cleaved into: Matrix protein p17 (MA)]

3D Structure

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Related Domains

Browse other domains in Gag_p24 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein N-terminal domain(170.2)

TT-groupRetrovirus capsid protein N-terminal domain(170.2.1)

FFamilyGag_p24(170.2.1.1)

Pfam Families

PF00607Gag_p24

gag protein p24 N-terminal domain

ClanCL0148Viral_Gag

External Links

ECOD PDB View: 5UP4 RCSB PDB: 5UP4 PDBe: 5UP4 UniProt: B6DRA0

Downloads

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