ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5k4yD1 - ECOD Domain | ECOD

ECOD/Domains/e5k4yD1

e5k4yD1

UID: 002151360

PDB

Range: D:4002-4321
PDB: 5K4Y chain D(all domains)
UniProt: Q7YW97 (all domains)

Molecule: L-threonine 3-dehydrogenase

3D Structure

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Related Domains

Browse other domains in Epimerase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyEpimerase(2003.1.1.20)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128
Chloride ionCL
Sodium ionNA
metal

Pfam Families

PF01370Epimerase

NAD dependent epimerase/dehydratase family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5K4Y RCSB PDB: 5K4Y PDBe: 5K4Y UniProt: Q7YW97

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.