ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5n8nK1 - ECOD Domain | ECOD

ECOD/Domains/e5n8nK1

e5n8nK1

UID: 002152021

PDB

Range: K:4-135
PDB: 5N8N chain K(all domains)
UniProt: Q9I749 (all domains)
Gene: tssB1

Molecule: Type VI secretion system sheath protein TssB1 (Sheath protein HsiB1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in T6SS_VipA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupSubtilisin-like(2499)

HH-groupDomain III of tail sheath protein Gp18(2499.2)

TT-groupDomain III of tail sheath protein Gp18(2499.2.1)

FFamilyT6SS_VipA(2499.2.1.3)

Pfam Families

PF05591T6SS_VipA

Type VI secretion system, VipA, VC_A0107 or Hcp2

External Links

ECOD PDB View: 5N8N RCSB PDB: 5N8N PDBe: 5N8N UniProt: Q9I749

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure