ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5n8nW1 - ECOD Domain | ECOD

ECOD/Domains/e5n8nW1

e5n8nW1

UID: 002152027

PDB

Range: W:4-135
PDB: 5N8N chain W(all domains)
UniProt: Q9I749 (all domains)
Gene: tssB1

Molecule: Type VI secretion system sheath protein TssB1 (Sheath protein HsiB1)

3D Structure

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Related Domains

Browse other domains in T6SS_VipA →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupSubtilisin-like(2499)

HH-groupDomain III of tail sheath protein Gp18(2499.2)

TT-groupDomain III of tail sheath protein Gp18(2499.2.1)

FFamilyT6SS_VipA(2499.2.1.3)

Pfam Families

PF05591T6SS_VipA

Type VI secretion system, VipA, VC_A0107 or Hcp2

External Links

ECOD PDB View: 5N8N RCSB PDB: 5N8N PDBe: 5N8N UniProt: Q9I749

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