ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ngiB1 - ECOD Domain | ECOD

ECOD/Domains/e5ngiB1

e5ngiB1

UID: 002152599

PDB

Range: B:48-128
PDB: 5NGI chain B(all domains)
UniProt: P35818 (all domains)
Gene: xcpQ

Molecule: Secretin XcpQ (General secretion pathway protein D) (Type II secretion system protein D) (T2SS protein D)

3D Structure

Loading viewer...

Related Domains

Browse other domains in type_II_gspD_N0 →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupN0 domain in phage tail proteins and secretins-like(3070)

HH-groupN0 domain in phage tail proteins and secretins(3070.1)

TT-groupN0 domain in phage tail proteins and secretins(3070.1.1)

FFamilytype_II_gspD_N0(3070.1.1.11)

Pfam Families

PF21305type_II_gspD_N0

GspD-like, N0 domain

ClanCL0751Secretin_N0

External Links

ECOD PDB View: 5NGI RCSB PDB: 5NGI PDBe: 5NGI UniProt: P35818

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure