ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5n0gA1 - ECOD Domain | ECOD

ECOD/Domains/e5n0gA1

e5n0gA1

UID: 002157203

PDB

Range: A:2-209
PDB: 5N0G chain A(all domains)
UniProt: D5AV08 (all domains)
Gene: cobH

Molecule: Precorrin-8X methylmutase

3D Structure

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Related Domains

Browse other domains in CbiC →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupPrecorrin-8X methylmutase CbiC/CobH(2007.7)

TT-groupPrecorrin-8X methylmutase CbiC/CobH(2007.7.1)

FFamilyCbiC(2007.7.1.1)

Ligands

in contact, ≤ 4 Å

3-[(1~{R},2~{S},3~{S},4~{Z},7~{S},8~{S},9~{Z},15~{R},17~{R},18~{R},19~{R})-2,7,18-tris(2-hydroxy-2-oxoethyl)-3,13,17-tris(3-hydroxy-3-oxopropyl)-1,2,7,12,12,15,17-heptamethyl-5-prop-2-enyl-3,8,15,18,19,21-hexahydrocorrin-8-yl]propanoic acid8F5

+ 1 additive (Glycerin)

GlycerinGOL

Pfam Families

Precorrin-8X methylmutase

External Links

ECOD PDB View: 5N0G RCSB PDB: 5N0G PDBe: 5N0G UniProt: D5AV08

Downloads

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DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.