ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6b5eF1 - ECOD Domain | ECOD

ECOD/Domains/e6b5eF1

e6b5eF1

UID: 002161506

PDB

Range: F:1-286
PDB: 6B5E chain F(all domains)
UniProt: P9WH13 (all domains)
Gene: rmlA

Molecule: Glucose-1-phosphate thymidylyltransferase

3D Structure

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Related Domains

Browse other domains in NTP_transferase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyNTP_transferase(7516.1.1.1)

Ligands

in contact, ≤ 4 Å

2'deoxy-Thymidine-5'-Diphospho-Alpha-D-GlucoseDAU
drugDrugBank DB03751
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00483NTP_transferase

Nucleotidyl transferase

ClanCL0110GT-A

External Links

ECOD PDB View: 6B5E RCSB PDB: 6B5E PDBe: 6B5E UniProt: P9WH13

Downloads

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