ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6b5kB1 - ECOD Domain | ECOD

ECOD/Domains/e6b5kB1

e6b5kB1

UID: 002161510

PDB

Range: B:1-286
PDB: 6B5K chain B(all domains)
UniProt: P9WH13 (all domains)
Gene: rmlA

Molecule: Glucose-1-phosphate thymidylyltransferase

3D Structure

Loading viewer...

Related Domains

Browse other domains in NTP_transferase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyNTP_transferase(7516.1.1.1)

Ligands

in contact, ≤ 4 Å

Thymidine 5'-triphosphateTTP
drugDrugBank DB02452
Thymidine-5'- DiphosphateTYD
drugDrugBank DB03103

Pfam Families

PF00483NTP_transferase

Nucleotidyl transferase

ClanCL0110GT-A

External Links

ECOD PDB View: 6B5K RCSB PDB: 6B5K PDBe: 6B5K UniProt: P9WH13

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Magnesium ion

metal

Shown in the structure viewer. Drug annotations from DrugDomain.