ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5okdA2 - ECOD Domain | ECOD

ECOD/Domains/e5okdA2

e5okdA2

UID: 002163496

PDB

Range: A:2-233
PDB: 5OKD chain A(all domains)
UniProt: P31800 (all domains)
Gene: UQCRC1

Molecule: Cytochrome b-c1 complex subunit 1, mitochondrial (Complex III subunit 1) (Core protein I) (Ubiquinol-cytochrome-c reductase complex core protein 1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Peptidase_M16,Peptidase_M16_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupLuxS, MPP, ThrRS/AlaRS common domain(309)

HH-groupLuxS, MPP, ThrRS/AlaRS common domain(309.1)

TT-groupLuxS/MPP-like metallohydrolase(309.1.1)

FFamilyPeptidase_M16,Peptidase_M16_C(309.1.1.2)

Pfam Families

PF00675Peptidase_M16

Insulinase (Peptidase family M16)

ClanCL0094Peptidase_ME

PF05193Peptidase_M16_C

Peptidase M16 inactive domain

ClanCL0094Peptidase_ME

External Links

ECOD PDB View: 5OKD RCSB PDB: 5OKD PDBe: 5OKD UniProt: P31800

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure