ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nijA1 - ECOD Domain | ECOD

ECOD/Domains/e5nijA1

e5nijA1

UID: 002165118

PDB

Range: A:56-332
PDB: 5NIJ chain A(all domains)
UniProt: Q39119 (all domains)
Gene: At4g32940

Molecule: Vacuolar-processing enzyme gamma-isozyme (EC 3.4.22.34) (Asparaginyl endopeptidase gamma-VPE) (Gamma-VPE)

3D Structure

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Related Domains

Browse other domains in Peptidase_C13 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupCaspase-like(7575)

HH-groupCaspase-like(7575.1)

TT-groupCaspase-like(7575.1.1)

FFamilyPeptidase_C13(7575.1.1.3)

Pfam Families

PF01650Peptidase_C13

Peptidase C13 family

ClanCL0093Peptidase_CD

External Links

ECOD PDB View: 5NIJ RCSB PDB: 5NIJ PDBe: 5NIJ UniProt: Q39119

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