ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5yb2C1 - ECOD Domain | ECOD

ECOD/Domains/e5yb2C1

e5yb2C1

UID: 002165550

PDB

Range: C:2-36
PDB: 5YB2 chain C(all domains)
UniProt: P04578 (all domains)
Gene: env

Molecule: Envelope glycoprotein gp160 (Env polyprotein) [Cleaved into: Surface protein gp120 (SU) (Glycoprotein 120) (gp120); Transmembrane protein gp41 (TM) (Glycoprotein 41) (gp41)]

3D Structure

Loading viewer...

Related Domains

Browse other domains in this classification →

Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

External Links

ECOD PDB View: 5YB2 RCSB PDB: 5YB2 PDBe: 5YB2 UniProt: P04578

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure