ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5xiiB2 - ECOD Domain | ECOD

ECOD/Domains/e5xiiB2

e5xiiB2

UID: 002167426

PDB

Range: B:600-719
PDB: 5XII chain B(all domains)
UniProt: S8G8I1 (all domains)
Gene: TGME49_219850

Molecule: proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in HGTP_anticodon →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupAnticodon-binding domain of Class II aaRS(7502)

HH-groupAnticodon-binding domain of Class II aaRS(7502.1)

TT-groupAnticodon-binding domain of Class II aaRS(7502.1.1)

FFamilyHGTP_anticodon(7502.1.1.1)

Pfam Families

PF03129HGTP_anticodon

Anticodon binding domain

ClanCL0458IIaaRS-ABD

External Links

ECOD PDB View: 5XII RCSB PDB: 5XII PDBe: 5XII UniProt: S8G8I1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure