ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5obtB1 - ECOD Domain | ECOD

ECOD/Domains/e5obtB1

e5obtB1

UID: 002171614

PDB

Range: B:56-283
PDB: 5OBT chain B(all domains)
UniProt: Q39119 (all domains)
Gene: At4g32940

Molecule: Vacuolar-processing enzyme gamma-isozyme (EC 3.4.22.34) (Asparaginyl endopeptidase gamma-VPE) (Gamma-VPE)

3D Structure

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Related Domains

Browse other domains in Peptidase_C13 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupCaspase-like(7575)

HH-groupCaspase-like(7575.1)

TT-groupCaspase-like(7575.1.1)

FFamilyPeptidase_C13(7575.1.1.3)

Pfam Families

PF01650Peptidase_C13

Peptidase C13 family

ClanCL0093Peptidase_CD

External Links

ECOD PDB View: 5OBT RCSB PDB: 5OBT PDBe: 5OBT UniProt: Q39119

Downloads

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