ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6crjC1 - ECOD Domain | ECOD

ECOD/Domains/e6crjC1

e6crjC1

UID: 002172580

PDB

Range: C:228-276,C:418-540
PDB: 6CRJ chain C(all domains)
UniProt: Q83884 (all domains)
Gene: ORF2

Molecule: Capsid protein VP1 (CP) (Coat protein) (p59) [Cleaved into: Soluble capsid protein (Protein 30k) (p30)]

3D Structure

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Related Domains

Browse other domains in Calici_coat_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupCapsid protein protrusion (P) domain(1.2)

TT-groupCapsid protein protrusion (P) domain(1.2.1)

FFamilyCalici_coat_C(1.2.1.2)

Pfam Families

PF08435Calici_coat_C

Calicivirus coat protein C-terminal

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 6CRJ RCSB PDB: 6CRJ PDBe: 6CRJ UniProt: Q83884

Downloads

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