ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vbrB1 - ECOD Domain | ECOD

ECOD/Domains/e5vbrB1

e5vbrB1

UID: 002172890

PDB

Range: B:28-136
PDB: 5VBR chain B(all domains)
UniProt: Q58F21 (all domains)
Gene: BRDT

Molecule: Bromodomain testis-specific protein

3D Structure

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Related Domains

Browse other domains in Bromodomain →

Classification

AArchitecturealpha bundles(a.7)

XX-groupBromodomain-like(633)

HH-groupBromodomain(633.1)

TT-groupBromodomain(633.1.1)

FFamilyBromodomain(633.1.1.1)

Ligands

in contact, ≤ 4 Å

VolasertibIBI
drugDrugBank DB12062
Chloride ionCL
within 5 Å only

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

PF00439Bromodomain

Bromodomain

External Links

ECOD PDB View: 5VBR RCSB PDB: 5VBR PDBe: 5VBR UniProt: Q58F21

Downloads

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1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.