ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vmzA1 - ECOD Domain | ECOD

ECOD/Domains/e5vmzA1

e5vmzA1

UID: 002172912

PDB

Range: A:545-602
PDB: 5VMZ chain A(all domains)
UniProt: Q86T24 (all domains)
Gene: ZBTB33

Molecule: Transcriptional regulator Kaiso

3D Structure

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Related Domains

Browse other domains in zf-C2H2_4 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyzf-C2H2_4(386.1.1.24)

Ligands

in contact, ≤ 4 Å

L-tartaric acidTLA
drugDrugBank DB09459
Chloride ionCL
Zinc ionZN

Pfam Families

PF13894zf-C2H2_4

C2H2-type zinc finger

ClanCL0361C2H2-zf

External Links

ECOD PDB View: 5VMZ RCSB PDB: 5VMZ PDBe: 5VMZ UniProt: Q86T24

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.