ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ew9A1 - ECOD Domain | ECOD

ECOD/Domains/e4ew9A1

e4ew9A1

UID: 000223595

PDB

Range: A:-1-193
PDB: 4EW9 chain A(all domains)
UniProt: B9MKT4 (all domains)
Gene: Athe_1854

Molecule: Pectate lyase

3D Structure

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Related Domains

Browse other domains in Pectate_lyase →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyPectate_lyase(207.2.1.9)

Ligands

in contact, ≤ 4 Å

alpha-D-galacturonic acidADA
drugDrugBank DB03511
Calcium ionCA
metal
D-galacturonic acid

Pfam Families

PF03211Pectate_lyase

Pectate lyase

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 4EW9 RCSB PDB: 4EW9 PDBe: 4EW9 UniProt: B9MKT4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Acetate, (4r)-2-Methylpentane-2,4-Diol)

AcetateACT
DrugBank DB14511
(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.