ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1mdoA2 - ECOD Domain | ECOD

ECOD/Domains/e1mdoA2

e1mdoA2

UID: 000224189

RepresentativePDB

Range: A:9-259
PDB: 1MDO chain A(all domains)
UniProt: Q8ZNF3 (all domains)
Gene: arnB

Molecule: ArnB aminotransferase

3D Structure

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Related Domains

Browse other domains in DegT_DnrJ_EryC1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyDegT_DnrJ_EryC1(7577.1.1.6)

Ligands

in contact, ≤ 4 Å

Pyridoxamine-5'-PhosphatePMP
drugDrugBank DB02142

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01041DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 1MDO RCSB PDB: 1MDO PDBe: 1MDO UniProt: Q8ZNF3

Downloads

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