ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4avdA1 - ECOD Domain | ECOD

ECOD/Domains/e4avdA1

e4avdA1

UID: 000224653

PDB

Range: A:0-109
PDB: 4AVD chain A(all domains)
UniProt: O76242 (all domains)

Molecule: NEURAL HEMOGLOBIN

3D Structure

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Related Domains

Browse other domains in Globin →

Classification

AArchitecturealpha arrays(a.6)

XX-groupGlobin-like(106)

HH-groupGlobin-like(106.1)

TT-groupGlobin-like(106.1.1)

FFamilyGlobin(106.1.1.1)

Ligands

in contact, ≤ 4 Å

Carbon monoxideCMO
drugDrugBank DB11588
FerrohemeHEM
drugDrugBank DB18267

+ 3 additives (Acetate, Glycerin, Sulfate ion)

Pfam Families

Globin

ClanCL0090Globin

External Links

ECOD PDB View: 4AVD RCSB PDB: 4AVD PDBe: 4AVD UniProt: O76242

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

AcetateACT
DrugBank DB14511
GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.