ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5zdhB4 - ECOD Domain | ECOD

ECOD/Domains/e5zdhB4

e5zdhB4

UID: 002320660

PDB

Range: B:324-643
PDB: 5ZDH chain B(all domains)
UniProt: E3PJ86 (all domains)
Gene: gspD2

Molecule: Secretin GspD 2 (General secretion pathway protein D 2) (GspD) (GspD-beta secretin) (Type II secretion system protein D 2) (T2SS protein D)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupRing-building motif II in type III secretion system(327.16)

TT-groupRing-building motif II in type III secretion system(327.16.1)

FFamilySecretin(327.16.1.1)

Pfam Families

PF00263Secretin

Bacterial type II and III secretion system protein

External Links

ECOD PDB View: 5ZDH RCSB PDB: 5ZDH PDBe: 5ZDH UniProt: E3PJ86

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