ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5zdhS1 - ECOD Domain | ECOD

ECOD/Domains/e5zdhS1

e5zdhS1

UID: 002320715

PDB

Range: S:1-107
PDB: 5ZDH chain S(all domains)
UniProt: E3PJ88 (all domains)
Gene: gspS2

Molecule: Pilotin AspS 2 (Type II secretion system-beta protein GspS-beta)

3D Structure

Loading viewer...

Related Domains

Browse other domains in T2SSS_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupputative secreted protein PA3611(3148)

HH-groupputative secreted protein PA3611(3148.1)

TT-groupputative secreted protein PA3611(3148.1.1)

FFamilyT2SSS_2(3148.1.1.2)

Pfam Families

PF16549T2SSS_2

Type II secretion system (T2SS) pilotin, S protein

ClanCL0940AspS-like

External Links

ECOD PDB View: 5ZDH RCSB PDB: 5ZDH PDBe: 5ZDH UniProt: E3PJ88

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure