ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5zdzC3 - ECOD Domain | ECOD

ECOD/Domains/e5zdzC3

e5zdzC3

UID: 002320984

PDB

Range: C:792-957
PDB: 5ZDZ chain C(all domains)
UniProt: P15919 (all domains)
Gene: Rag1

Molecule: V(D)J recombination-activating protein 1 (RAG-1) [Includes: Endonuclease RAG1 (EC 3.1.-.-); E3 ubiquitin-protein ligase RAG1 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase RAG1)]

3D Structure

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Related Domains

Browse other domains in PF26104 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupV(D)J recombination-activating protein 1 helical bundle domain(3948)

HH-groupV(D)J recombination-activating protein 1 helical bundle domain(3948.1)

TT-groupV(D)J recombination-activating protein 1 helical bundle domain(3948.1.1)

FFamilyPF26104(3948.1.1.3)

Pfam Families

PF26104RAG1_ZnH2

Recombination-activation protein 1 (RAG1) ZnH2 domain

External Links

ECOD PDB View: 5ZDZ RCSB PDB: 5ZDZ PDBe: 5ZDZ UniProt: P15919

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