ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4gurA3 - ECOD Domain | ECOD

ECOD/Domains/e4gurA3

e4gurA3

UID: 002321300

PDB

Range: A:365-658,A:760-822
PDB: 4GUR chain A(all domains)
UniProt: Q8NB78 (all domains)
Gene: KDM1B

Molecule: Lysine-specific histone demethylase 1B

3D Structure

Loading viewer...

Related Domains

Browse other domains in Amino_oxidase →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFAD-linked reductases, C-terminal domain-like(244)

HH-groupFAD-linked reductases-C(244.1)

TT-groupFAD-linked reductases-C(244.1.1)

FFamilyAmino_oxidase(244.1.1.6)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF01593Amino_oxidase

Flavin containing amine oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4GUR RCSB PDB: 4GUR PDBe: 4GUR UniProt: Q8NB78

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.