ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3shfA7 - ECOD Domain | ECOD

ECOD/Domains/e3shfA7

e3shfA7

UID: 002321701

PDB

Range: A:605-916
PDB: 3SHF chain A(all domains)
UniProt: O88879 (all domains)
Gene: Apaf1

Molecule: Apoptotic protease-activating factor 1 (APAF-1)

3D Structure

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Related Domains

Browse other domains in WD40, ANAPC4_WD40, Beta-prop_NOL10_N, Beta-prop_IFT122_1st →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyWD40, ANAPC4_WD40, Beta-prop_NOL10_N, Beta-prop_IFT122_1st(5.1.4.274)

Pfam Families

WD domain, G-beta repeat

ClanCL0186Beta_propeller

PF12894ANAPC4_WD40

Anaphase-promoting complex subunit 4 WD40 domain

ClanCL0186Beta_propeller

PF23098Beta-prop_NOL10_N

Nucleolar protein 10-like, N-terminal domain

ClanCL0186Beta_propeller

PF23381Beta-prop_IFT122_1st

IFT122 first beta-propeller

External Links

ECOD PDB View: 3SHF RCSB PDB: 3SHF PDBe: 3SHF UniProt: O88879

Downloads

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Beta_propeller