ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6f6rA1 - ECOD Domain | ECOD

ECOD/Domains/e6f6rA1

e6f6rA1

UID: 002325220

PDB

Range: A:118-297
PDB: 6F6R chain A(all domains)
UniProt: P29466 (all domains)
Gene: CASP1

Molecule: Caspase-1

3D Structure

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Related Domains

Browse other domains in Peptidase_C14 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupCaspase-like(7575)

HH-groupCaspase-like(7575.1)

TT-groupCaspase-like(7575.1.1)

FFamilyPeptidase_C14(7575.1.1.1)

Ligands

in contact, ≤ 4 Å

(3~{S})-3-[[(2~{R})-2-[3-methyl-2,6-bis(oxidanylidene)-5-[[4-(quinoxalin-2-ylamino)phenyl]carbonylamino]pyrimidin-1-yl]propanoyl]amino]-4-oxidanyl-butanoic acidCVE

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF00656Peptidase_C14

Caspase domain

ClanCL0093Peptidase_CD

External Links

ECOD PDB View: 6F6R RCSB PDB: 6F6R PDBe: 6F6R UniProt: P29466

Downloads

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Drug annotations from DrugDomain.