ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vsuA3 - ECOD Domain | ECOD

ECOD/Domains/e5vsuA3

e5vsuA3

UID: 002325332

RepresentativePDB

Range: A:292-398,A:432-445
PDB: 5VSU chain A(all domains)
UniProt: P49960 (all domains)
Gene: PRP24

Molecule: U4/U6 snRNA-associated-splicing factor PRP24 (U4/U6 snRNP protein)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamily(304.9.1.12)

Pfam Families

PF05391Lsm_interact

Lsm interaction motif

PF16842RRM_occluded

Occluded RNA-recognition motif

ClanCL0221RRM

External Links

ECOD PDB View: 5VSU RCSB PDB: 5VSU PDBe: 5VSU UniProt: P49960

Downloads

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