ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ngxA1 - ECOD Domain | ECOD

ECOD/Domains/e5ngxA1

e5ngxA1

UID: 002325463

PDB

Range: A:1-126
PDB: 5NGX chain A(all domains)
UniProt: P00138 (all domains)

Molecule: Cytochrome c'

3D Structure

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Related Domains

Browse other domains in Cytochrom_C_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupCytochromes(601.2)

TT-groupCytochromes(601.2.1)

FFamilyCytochrom_C_2(601.2.1.4)

Ligands

in contact, ≤ 4 Å

Ferroheme CHEC
drugDrugBank DB03317
NitriteNO2
drugDrugBank DB12529

+ 1 additive (Glycerin)

Pfam Families

PF01322Cytochrom_C_2

Cytochrome C'

External Links

ECOD PDB View: 5NGX RCSB PDB: 5NGX PDBe: 5NGX UniProt: P00138

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.