ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3gneB1 - ECOD Domain | ECOD

ECOD/Domains/e3gneB1

e3gneB1

UID: 002325789

PDB

Range: B:2-243
PDB: 3GNE chain B(all domains)
UniProt: Q9DTZ2 (all domains)
Gene: vAL-1

Molecule: VAL-1

3D Structure

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Related Domains

Browse other domains in Polysacc_lyase_14 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyPolysacc_lyase_14(10.1.1.47)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Citrate anion)

GlycerinGOL
DrugBank DB09462
Citrate anionFLC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21294Polysacc_lyase_14

Polysaccharide lyase 14

ClanCL0004Concanavalin

External Links

ECOD PDB View: 3GNE RCSB PDB: 3GNE PDBe: 3GNE UniProt: Q9DTZ2

Downloads

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