ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5xwpB2 - ECOD Domain | ECOD

ECOD/Domains/e5xwpB2

e5xwpB2

UID: 002326834

PDB

Range: B:867-1153
PDB: 5XWP chain B(all domains)
UniProt: C7NBY4 (all domains)
Gene: cas13a

Molecule: CRISPR-associated endoribonuclease Cas13a (EC 3.1.-.-) (CRISPR-associated endoribonuclease C2c2) (EndoRNase) (LbuC2c2)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Cas13a_C →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupHEPN(601.7)

TT-groupNucleotidyltransferase substrate binding subunit/domain(601.7.1)

FFamilyCas13a_C(601.7.1.40)

Pfam Families

PF28350Cas13a_C

Cas13a C-terminal HEPN-like domain

ClanCL0291KNTase_C

External Links

ECOD PDB View: 5XWP RCSB PDB: 5XWP PDBe: 5XWP UniProt: C7NBY4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure