ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e6cikC1 - ECOD Domain | ECOD

ECOD/Domains/e6cikC1

e6cikC1

UID: 002327348

PDB

Range: C:396-457
PDB: 6CIK chain C(all domains)
UniProt: P15919 (all domains)
Gene: Rag1

Molecule: V(D)J recombination-activating protein 1 (RAG-1) [Includes: Endonuclease RAG1 (EC 3.1.-.-); E3 ubiquitin-protein ligase RAG1 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase RAG1)]

3D Structure

Loading viewer...

Related Domains

Browse other domains in RAG1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupRibbon-helix-helix(101.1.11)

FFamilyRAG1(101.1.11.18)

Pfam Families

Recombination-activation protein 1 (RAG1) nonamer-binding domain

External Links

ECOD PDB View: 6CIK RCSB PDB: 6CIK PDBe: 6CIK UniProt: P15919

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure