ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yugB2 - ECOD Domain | ECOD

ECOD/Domains/e5yugB2

e5yugB2

UID: 002329009

PDB

Range: B:56-99
PDB: 5YUG chain B(all domains)
UniProt: Q8W4L5 (all domains)
Gene: VAL1

Molecule: B3 domain-containing transcription repressor VAL1 (Protein HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE 2) (Protein VP1/ABI3-LIKE 1)

3D Structure

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Related Domains

Browse other domains in zf_VAL1_N →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyzf_VAL1_N(376.1.3.53)

Pfam Families

PF25813zf_VAL1_N

VAL1-like, N-terminal zinc finger domain

ClanCL0229RING

External Links

ECOD PDB View: 5YUG RCSB PDB: 5YUG PDBe: 5YUG UniProt: Q8W4L5

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