ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5z00C1 - ECOD Domain | ECOD

ECOD/Domains/e5z00C1

e5z00C1

UID: 002329065

PDB

Range: C:287-397
PDB: 5Z00 chain C(all domains)
UniProt: Q8W4L5 (all domains)
Gene: VAL1

Molecule: B3 domain-containing transcription repressor VAL1 (Protein HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE 2) (Protein VP1/ABI3-LIKE 1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in B3 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupType II restriction endonuclease effector domain(1.1.11)

FFamilyB3(1.1.11.1)

Pfam Families

B3 DNA binding domain

ClanCL0405DNA_b-psBarrel

External Links

ECOD PDB View: 5Z00 RCSB PDB: 5Z00 PDBe: 5Z00 UniProt: Q8W4L5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure