ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5nf1B1 - ECOD Domain | ECOD

ECOD/Domains/e5nf1B1

e5nf1B1

UID: 002329931

PDB

Range: B:4-224
PDB: 5NF1 chain B(all domains)
UniProt: O26652 (all domains)
Gene: MTH_552

Molecule: Geranylgeranylglyceryl phosphate synthase (GGGP synthase) (GGGPS) (MtGGGPS) (EC 2.5.1.41) ((S)-3-O-geranylgeranylglyceryl phosphate synthase) (Phosphoglycerol geranylgeranyltransferase)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PcrB →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPcrB(2002.1.1.78)

Pfam Families

PcrB family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5NF1 RCSB PDB: 5NF1 PDBe: 5NF1 UniProt: O26652

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure