ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xlvB1 - ECOD Domain | ECOD

ECOD/Domains/e5xlvB1

e5xlvB1

UID: 002330119

PDB

Range: B:7-312
PDB: 5XLV chain B(all domains)
UniProt: P9WPA7 (all domains)
Gene: coaA

Molecule: Pantothenate kinase

3D Structure

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Related Domains

Browse other domains in PRK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyPRK(2004.1.1.44)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 4 additives (Glycerin, Sulfate ion, 1,2-ETHANEDIOL, …)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546
1,2-ETHANEDIOL

Pfam Families

Phosphoribulokinase / Uridine kinase family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5XLV RCSB PDB: 5XLV PDBe: 5XLV UniProt: P9WPA7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.