ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5yvgB1 - ECOD Domain | ECOD

ECOD/Domains/e5yvgB1

e5yvgB1

UID: 002330180

PDB

Range: B:11-317,B:371-890
PDB: 5YVG chain B(all domains)
UniProt: Q92973 (all domains)
Gene: TNPO1

Molecule: Transportin-1 (Importin beta-2) (Karyopherin beta-2) (M9 region interaction protein) (MIP)

3D Structure

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Related Domains

Browse other domains in HEAT, IBN_N, HEAT_EZ, TPR_IMB1, TPR_IPO5 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyHEAT, IBN_N, HEAT_EZ, TPR_IMB1, TPR_IPO5(109.4.1.1313)

Pfam Families

HEAT repeat

ClanCL0020TPR

Importin-beta N-terminal domain

ClanCL0020TPR

PF13513HEAT_EZ

HEAT-like repeat

ClanCL0020TPR

PF25574TPR_IMB1

Importin subunit beta-1-like, TPR repeats

ClanCL0020TPR

External Links

ECOD PDB View: 5YVG RCSB PDB: 5YVG PDBe: 5YVG UniProt: Q92973

Downloads

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PF25780TPR_IPO5

IPO5-like, TPR repeats

ClanCL0020TPR