ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6de5A1 - ECOD Domain | ECOD

ECOD/Domains/e6de5A1

e6de5A1

UID: 002330440

PDB

Range: A:13-258
PDB: 6DE5 chain A(all domains)
UniProt: P71968 (all domains)
Gene: ribD

Molecule: riboflavin biosynthesis protein RibD

3D Structure

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Related Domains

Browse other domains in RibD_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupDihydrofolate reductases(7501)

HH-groupDihydrofolate reductases(7501.1)

TT-groupDihydrofolate reductases(7501.1.1)

FFamilyRibD_C(7501.1.1.2)

Ligands

in contact, ≤ 4 Å

NADPHNDP
drugDrugBank DB02338
6-ethyl-5-{(3S)-3-[2-methoxy-5-(pyridin-4-yl)phenyl]but-1-yn-1-yl}pyrimidine-2,4-diamineG8J

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

RibD C-terminal domain

ClanCL0387DHFred

External Links

ECOD PDB View: 6DE5 RCSB PDB: 6DE5 PDBe: 6DE5 UniProt: P71968

Downloads

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