ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5nvoA1 - ECOD Domain | ECOD

ECOD/Domains/e5nvoA1

e5nvoA1

UID: 002332652

PDB

Range: A:216-350
PDB: 5NVO chain A(all domains)
UniProt: Q9UBC3 (all domains)
Gene: DNMT3B

Molecule: DNA (cytosine-5)-methyltransferase 3B (Dnmt3b) (EC 2.1.1.37) (DNA methyltransferase HsaIIIB) (DNA MTase HsaIIIB) (M.HsaIIIB)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PWWP →

Classification

AArchitecturebeta barrels(a.1)

XX-groupSH3(4)

HH-groupSH3(4.1)

TT-groupSH3(4.1.1)

FFamilyPWWP(4.1.1.12)

Pfam Families

PWWP domain

ClanCL0010SH3

External Links

ECOD PDB View: 5NVO RCSB PDB: 5NVO PDBe: 5NVO UniProt: Q9UBC3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure