ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6g90E1 - ECOD Domain | ECOD

ECOD/Domains/e6g90E1

e6g90E1

UID: 002391254

PDB

Range: E:2-542
PDB: 6G90 chain E(all domains)
UniProt: Q03776 (all domains)
Gene: PRP42

Molecule: U1 small nuclear ribonucleoprotein component PRP42 (U1 snRNP protein PRP42) (65 kDa snRNP protein) (Pre-mRNA-processing factor 42)

3D Structure

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Related Domains

Browse other domains in HAT_PRP39_N, HAT_PRP39_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyHAT_PRP39_N, HAT_PRP39_C(109.4.1.1303)

Pfam Families

PF23240HAT_PRP39_N

PRP39 N-terminal HAT repeat

ClanCL0020TPR

PF23241HAT_PRP39_C

PRP39 C-terminal HAT repeat

ClanCL0020TPR

External Links

ECOD PDB View: 6G90 RCSB PDB: 6G90 PDBe: 6G90 UniProt: Q03776

Downloads

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