ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5zusB1 - ECOD Domain | ECOD

ECOD/Domains/e5zusB1

e5zusB1

UID: 002393068

PDB

Range: B:225-530
PDB: 5ZUS chain B(all domains)
UniProt: A0A0E3X5I8 (all domains)
Gene: VP1

Molecule: Capsid protein (Major capsid protein) (VP1) (Viral protein 1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Calici_coat_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyCalici_coat_C(10.2.1.43)

Pfam Families

PF08435Calici_coat_C

Calicivirus coat protein C-terminal

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 5ZUS RCSB PDB: 5ZUS PDBe: 5ZUS UniProt: A0A0E3X5I8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure