ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6ddqB1 - ECOD Domain | ECOD

ECOD/Domains/e6ddqB1

e6ddqB1

UID: 002398354

PDB

Range: B:24-60,B:226-509,B:538-552
PDB: 6DDQ chain B(all domains)
UniProt: P49902 (all domains)
Gene: NT5C2

Molecule: Cytosolic purine 5'-nucleotidase

3D Structure

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Related Domains

Browse other domains in 5_nucleotid →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupHAD-like(2006.1.1)

FFamily5_nucleotid(2006.1.1.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Phosphate ion, 1,2-ETHANEDIOL)

Phosphate ionPO4
DrugBank DB14523
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF057615_nucleotid

5' nucleotidase family

ClanCL0137HAD

External Links

ECOD PDB View: 6DDQ RCSB PDB: 6DDQ PDBe: 6DDQ UniProt: P49902

Downloads

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