ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gh3A1 - ECOD Domain | ECOD

ECOD/Domains/e6gh3A1

e6gh3A1

UID: 002402375

PDB

Range: A:310-806
PDB: 6GH3 chain A(all domains)
UniProt: D7UT17 (all domains)
Gene: lbpA

Molecule: Laminaribiose phosphorylase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_36 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyGlyco_hydro_36(109.2.1.36)

Ligands

in contact, ≤ 4 Å

Alpha-D-mannose 1-phosphateM1P
drugDrugBank DB17678
Chloride ionCL

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Sulfate ionSO4

Pfam Families

PF17167Glyco_hydro_94

Glycosyl hydrolase 94 superfamily, catalytic domain

ClanCL00596_Hairpin

External Links

ECOD PDB View: 6GH3 RCSB PDB: 6GH3 PDBe: 6GH3 UniProt: D7UT17

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.