ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e6gvdA1 - ECOD Domain | ECOD

ECOD/Domains/e6gvdA1

e6gvdA1

UID: 002403282

PDB

Range: A:178-525
PDB: 6GVD chain A(all domains)
UniProt: G4FEF4 (all domains)
Gene: galA

Molecule: Alpha-galactosidase

3D Structure

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Related Domains

Browse other domains in Melibiase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyMelibiase(2002.1.1.87)

Ligands

in contact, ≤ 4 Å

(1~{S},2~{S},3~{S},4~{S})-5-(hydroxymethyl)cyclohex-5-ene-1,2,3,4-tetrolFDK
Magnesium ionMG
metal

+ 1 additive (Sulfate ion)

Sulfate ion

Pfam Families

PF02065Melibiase

Melibiase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 6GVD RCSB PDB: 6GVD PDBe: 6GVD UniProt: G4FEF4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.