ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nibA1 - ECOD Domain | ECOD

ECOD/Domains/e5nibA1

e5nibA1

UID: 002404560

PDB

Range: A:258-509
PDB: 5NIB chain A(all domains)
UniProt: P51449 (all domains)
Gene: RORC

Molecule: Nuclear receptor ROR-gamma

3D Structure

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Related Domains

Browse other domains in Hormone_recep →

Classification

AArchitecturealpha arrays(a.6)

XX-groupNuclear receptor ligand-binding domain(188)

HH-groupNuclear receptor ligand-binding domain(188.1)

TT-groupNuclear receptor ligand-binding domain(188.1.1)

FFamilyHormone_recep(188.1.1.1)

Ligands

in contact, ≤ 4 Å

~{N}-[4-[2-[(3-cyanophenyl)methoxy]pyridin-3-yl]thiophen-2-yl]-2-(4-ethylsulfonylphenyl)ethanamide8Y5
Sodium ionNA
metal

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS

Pfam Families

PF00104Hormone_recep

Ligand-binding domain of nuclear hormone receptor

External Links

ECOD PDB View: 5NIB RCSB PDB: 5NIB PDBe: 5NIB UniProt: P51449

Downloads

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DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.