ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5y0sD1 - ECOD Domain | ECOD

ECOD/Domains/e5y0sD1

e5y0sD1

UID: 002407311

PDB

Range: D:1-286
PDB: 5Y0S chain D(all domains)
UniProt: Q9X1K1 (all domains)
Gene: tmcAL

Molecule: tRNA(Met) cytidine acetate ligase (EC 6.3.1.22)

3D Structure

Loading viewer...

Related Domains

Browse other domains in HIGH_NTase1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilyHIGH_NTase1(2005.1.1.25)

Pfam Families

PF05636HIGH_NTase1

HIGH Nucleotidyl Transferase

ClanCL0039HUP

External Links

ECOD PDB View: 5Y0S RCSB PDB: 5Y0S PDBe: 5Y0S UniProt: Q9X1K1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure