ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5y4qD1 - ECOD Domain | ECOD

ECOD/Domains/e5y4qD1

e5y4qD1

UID: 002407420

PDB

Range: D:5-68
PDB: 5Y4Q chain D(all domains)
UniProt: Q4DA73 (all domains)
Gene: Tc00.1047053510339.50

Molecule: Spermidine synthase, putative

3D Structure

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Related Domains

Browse other domains in Spermine_synt_N →

Classification

AArchitecturebeta meanders(a.2)

XX-groupSpermidine synthase tetramerisation domain(3699)

HH-groupSpermidine synthase tetramerisation domain(3699.1)

TT-groupSpermidine synthase tetramerisation domain(3699.1.1)

FFamilySpermine_synt_N(3699.1.1.1)

Ligands

in contact, ≤ 4 Å

N-(4-methoxyphenyl)quinolin-4-amine8OF
5'-[(S)-(3-AMINOPROPYL)(METHYL)-LAMBDA~4~-SULFANYL]-5'-DEOXYADENOSINES4M

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17284Spermine_synt_N

Spermidine synthase tetramerisation domain

External Links

ECOD PDB View: 5Y4Q RCSB PDB: 5Y4Q PDBe: 5Y4Q UniProt: Q4DA73

Downloads

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