ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5yd7B1 - ECOD Domain | ECOD

ECOD/Domains/e5yd7B1

e5yd7B1

UID: 002407607

PDB

Range: B:32-262
PDB: 5YD7 chain B(all domains)
UniProt: Q9K2N0 (all domains)
Gene: blaVIM-2

Molecule: beta-lactamase (EC 3.5.2.6)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Lactamase_B →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyLactamase_B(247.1.1.1)

Pfam Families

PF00753Lactamase_B

Metallo-beta-lactamase superfamily

ClanCL0381Metallo-HOrase

External Links

ECOD PDB View: 5YD7 RCSB PDB: 5YD7 PDBe: 5YD7 UniProt: Q9K2N0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure